Sales Tax and Use Tax Audits in California: What Business Owners Need to Know

Marc Boulanger • August 12, 2025
A magnifying glass is sitting on top of a stack of books titled sales tax and use tax audits in california

Introduction: A Sales Tax Audit in California Is No Joke

If you run a business in California that collects or remits sales tax, you may someday face a knock from the California Department of Tax and Fee Administration (CDTFA) — and it often doesn’t come with much warning.


Whether you’re a retailer, contractor, service provider, or e-commerce seller, a sales or use tax audit can expose your business to massive back assessments, penalties, and long-term consequences if not handled properly.


In this guide, we’ll walk you through exactly how California sales and use tax audits work, what triggers them, and what Orange County business owners can do to protect themselves — and how to get representation for California CDTFA sales and use tax audits before it’s too late.


๐Ÿ”—If you’d rather see these concepts explained step by step, I recorded a short video that walks you through the CDTFA sales and use tax audit process. Watch the full video here


๐Ÿ“š What Are Sales and Use Taxes in California?


โœ… Sales Tax:

Charged on tangible personal property sold at retail in California. Collected by the seller, remitted to the CDTFA.


โœ… Use Tax:

Applies to out-of-state purchases used, stored, or consumed in California when sales tax wasn’t paid at the time of sale (e.g., online purchases, equipment, contractor tools).


๐Ÿง  What Is a CDTFA Audit?

A CDTFA audit is an in-depth review of your business’s books, records, and tax filings to determine if you’ve:

  • Underreported taxable sales
  • Over-claimed exempt sales
  • Failed to self-report use tax
  • Failed to remit collected tax to the state


It’s also your chance to see the strategies CDTFA auditors use during reviews so you know what to expect and how to respond effectively.


๐Ÿ” What Triggers a Sales Tax Audit in California?


Trigger Description
Late or missing filings Missed sales tax returns (Form CDTFA-401-A)
Large exempt sales Claiming high volume of non-taxable sales without documentation
Mismatch with income tax filings Gross sales on sales tax return don’t match what’s on your FTB or IRS returns
Industry audit sweep CDTFA routinely audits businesses in high-risk sectors
Tips from former employees or customers Anonymous reports trigger a surprising number of audits
Prior noncompliance Once audited, you’re more likely to be audited again


โš ๏ธ High-Risk Industries in California

The CDTFA frequently audits businesses in:

  • Restaurants and food service
  • Construction and contractors
  • Auto repair and dealerships
  • Retail and convenience stores
  • Medical equipment sales
  • Cannabis dispensaries
  • E-commerce businesses with mixed-taxable inventory


โœ… How to Prepare for a Sales or Use Tax Audit


โœ… 1. Gather All Sales and Purchase Records

You’ll need:

  • Invoices and receipts
  • POS summaries and Z-tapes
  • Bank statements and credit card reports
  • Purchase orders and vendor statements
  • Sales tax return copies (CDTFA-401-A)


โœ… 2. Identify and Support Exempt Sales

The most common issue in sales tax audits is unsupported exemptions.


Make sure you have:

  • Resale certificates (BOE-230)
  • Out-of-state shipping records
  • Documentation for labor-only charges


โœ… 3. Review Use Tax Compliance

If you purchased items from out of state or online:

  • Did you pay use tax voluntarily?
  • Did you report it on your sales tax return?


The CDTFA often assesses use tax on equipment or goods brought into California from vendors who didn’t charge tax.


โœ… 4. Avoid Red Flags in Recordkeeping

Auditors don’t like:

  • Rounded numbers with no documentation
  • Inconsistent reporting across sales tax, income tax, and bank deposits
  • Commingled funds or poor sales breakdowns


๐Ÿ›‘ What Happens If You Fail a Sales Tax Audit?

Failing a sales tax audit can mean much more than just paying the balance due. You must understand the consequences of an unfavorable audit result, which may include:

  • Back assessments for unreported taxable sales
  • 25% penalty for negligence
  • 10% penalty for late payment
  • Daily compounded interest
  • Referral to the FTB for collection if unpaid


๐Ÿ‘‰ What the FTB Can and Can’t Legally Seize


๐Ÿงพ What to Do If You Disagree with the Audit Results

You have the right to:


Timing is critical — most appeals must be filed within 30 days of the notice.


๐Ÿงญ How Boulanger CPA Helps Orange County Businesses

We help retailers, contractors, service providers, and e-commerce sellers across Irvine, Anaheim, Santa Ana, Fullerton, and beyond:

  • Prepare for CDTFA audits
  • Respond to audit notices and document requests
  • Defend against unreasonable assessments
  • Request audit reconsideration or appeal
  • Prevent FTB collections from CDTFA referrals


๐Ÿ“ž Call 657-218-5700
๐ŸŒ
www.orangecounty.cpa

Frequently Asked Questions

What is the difference between sales tax and use tax in California?

Sales tax is collected on taxable retail sales in California, while use tax applies to taxable purchases from out-of-state sellers where no sales tax was charged.

What triggers a sales or use tax audit?

Common triggers include discrepancies between reported sales and third-party data, industry audit trends, and prior compliance issues.

Who conducts sales and use tax audits in California?

The California Department of Tax and Fee Administration (CDTFA) conducts these audits to verify tax compliance.

How long does a CDTFA audit take?

The length of an audit varies but can range from several weeks to over a year depending on the complexity of your business and the audit scope.

Can I appeal the results of a CDTFA audit?

Yes. You can dispute findings through an appeal process that may include a hearing before the Office of Tax Appeals.

How can a CPA help with a sales or use tax audit?

A CPA can review records, prepare documentation, communicate with the CDTFA, and represent your business to protect your financial interests.


๐Ÿ“ฃ About the Author


Marc Boulanger, CPA is the founder of Boulanger CPA and Consulting PC, based in Orange County, California.


With over a decade of experience helping individuals and businesses resolve serious IRS and State tax issues, Marc specializes in tax resolution strategies including Offers in Compromise, wage garnishment relief, and back tax compliance.


He is licensed as a Certified Public Accountant in both California and Oklahoma, and has a proven track record of helping clients settle complex tax debts and regain financial stability.


๐Ÿ“ Learn more at www.orangecounty.cpa or call (657) 218-5700.


Marc The CPA's Tax Blog

A calculator is sitting on top of a pile of papers.
By Marc Boulanger September 12, 2025
Estimate your IRS tax settlement with our free Offer in Compromise calculator. Learn if you qualify for IRS tax forgiveness and how much you could save.
A woman is sitting at a desk holding a piece of paper that says cotta sales tax.
By Marc Boulanger September 12, 2025
Wondering if you can settle a sales tax bill with the CDTFA? Learn how California’s settlement and Offer in Compromise programs work for sales tax debt.
Edd vs. irs : payroll audit differences california employer insights
By Marc Boulanger September 12, 2025
EDD or IRS payroll audit? Learn the key differences, triggers, and consequences of state vs. federal payroll tax audits in California.
A book is open to a page that says audit
By Marc Boulanger September 12, 2025
CDTFA auditors follow a strict manual when calculating sales tax assessments. Learn what’s inside the CDTFA Audit Manual and how it’s used against California businesses.
A laptop computer is open to a page that says `` ultimate guide to ftb audits ''.
By Marc Boulanger September 12, 2025
Facing a Franchise Tax Board audit in California? Learn what triggers FTB audits, what records are requested, and how to defend yourself.
A woman is sitting at a desk with a laptop and a piece of paper.
By Marc Boulanger September 11, 2025
Facing an EDD employment tax interview? Learn what to expect, the questions asked, and how to prepare your records to protect your California business.
A woman is sitting at a desk looking at a piece of paper.
By Marc Boulanger September 11, 2025
EDD audit dragging on? Learn how long California payroll tax audits usually last, what delays them, and how to protect your business during the process.
A magnifying glass is sitting on top of a stack of papers.
By Marc Boulanger September 11, 2025
Restaurants, retailers, salons, and contractors are frequent CDTFA audit targets. Learn which industries are most at risk and how to prepare.
A woman is sitting at a desk reading a piece of paper that says cdtfa
By Marc Boulanger September 11, 2025
Hit with penalties after a CDTFA audit? Learn how to request penalty abatement, what qualifies as reasonable cause, and how to protect your business.
A book is open to a page that says cdtfa sales suppression audits explained
By Marc Boulanger September 11, 2025
Targeted by a CDTFA sales suppression audit? Learn what sales suppression is, how auditors detect it, and how to protect your California business.
More Posts